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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|168262193, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAAAKTQKS KRQEEQTNFI SWRFALLCGC ILLALVFLLG RAAWLQIIAP DMLVRQGDMR  60
   61 SLRVQEVSTS RGMITDRSGR PLAVSVPVKA IWADPKEVHD AGGISVGDRW KALSTALNIP 120
  121 LDQLSARINA NPKGRFIYLA RQVNPDMADY IKKLKLPGIH LREESRRYYP SGEVTAHLIG 180
  181 FTNVDSQGIE GVEKSFDKWL TGQPGERIVR KDRYGRVIED ISSTDSQAAH NLALSIDERL 240
  241 QALVYRELNN AVAFNKAESG SAVLVDVNTG EVLAMANSPS YNPNNLAGTP KDAMRNRTIT 300
  301 DVFEPGSTVK PMVVMTALQR GIVNENTVLN TVPYRINGHE IKDVARYSEL TLTGVLQKSS 360
  361 NVGVSKLALA MPSSALVDTY SRFGLGKATN LGLVGERSGL YPQKQRWSDI ERATFSFGYG 420
  421 LMVTPLQLAR VYATIGSYGI YRPLSITKVD PPVPGERIFP ESTVRTVVHM MESVALPGGG 480
  481 GVKAAIKGYR IAIKTGTAKK VGPDGRYINK YIAYTAGVAP ASQPRFALVV VINDPQAGKY 540
  541 YGGAVSAPVF GAIMGGVLRT MNIEPDALAT GEKNEFVINQ GEGTGGRS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle