YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|194404887, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNTKLANPA PLGLMGFGMT TILLNLHNAG FFALDGIILA MGIFYGGIAQ IFAGLLEYKK  60
   61 GNTFGLTAFT SYGSFWLTLV AILLMPKMGL TDAPDAQLLG AYLGLWGVFT LFMFFGTLKA 120
  121 ARALQFVFLS LTVLFALLAV GNITGNEATI HIAGWVGLVC GASAIYLAMG EVLNEQFGRT 180
  181 ILPIGEAH

Type	Start	End	Confidence
Cytoplasmic	1	8	0.83
Transmembrane Helix	9	29	0.84
Non-Cytoplasmic	30	35	0.64
Transmembrane Helix	36	56	0.91
Cytoplasmic	57	63	0.86
Transmembrane Helix	64	85	0.91
Non-Cytoplasmic	86	97	0.78
Transmembrane Helix	98	117	0.94
Cytoplasmic	118	123	0.82
Transmembrane Helix	124	144	0.91
Non-Cytoplasmic	145	150	0.77
Transmembrane Helix	151	170	0.95
Cytoplasmic	171	188	0.92