YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|222630253, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARRRVAALA SQLLRRQLLM RRPPPRFLSS AAAAASGPLD RLRSPPFART AARHGSPALS  60
   61 PWSRFGGQKR GMFIQTQSTP NPQSLMFYPG KPVMEVGSSD FPNARTAMTS PLAKALFAID 120
  121 GVTRVFFGSD FVTVTKSEET SWDYLKPEVF AVIMDFYSSG QSLFLDSSTA ASMDTAIHED 180
  181 DSEIVAMIKE LLETRIRPAV QDDGGDIEYR GFDPETGIVK LKMQGACSGC PSSSVTLKSG 240
  241 IENMLMHYVP EVKGVEQELD GDEEAELTGQ LE

Type	Start	End	Confidence
Signal Peptide	1	41	0.90
N-region	1	32
H-region	33	38
C-region	39	41
Cleavage Site	41	42
Non-Cytoplasmic	42	272	0.99