YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9743458
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEAGQDAPP PPEKGVEVEV FPAWARGVEE CEARLGVSAS RGLSSREAAA RLRAHGPNEL  60
   61 AEHPGPTLLQ LVAQQFDDTL VRILLAAAAV SFALALSSSA GAVTLSAFVE PLVIFLILVV 120
  121 NAAVGVWQET NAEKALEALR EIQSDHAAVL RDGDWLPSLP ARDLVPGDIV QLRVGDKVPA 180
  181 DMRVLRLVTS TLRVEQGSLT GETASVNKTA HQVPHDDADI QAKECMVFAG TTVVNGSAIC 240
  241 LVVHTGMATE IGKIHAQIHE AAQEDDDTPL KKKLNEFGEA LTKIIGLICA LVWLINVKYF 300
  301 LTFELDGWMP RNIRFSFEKC TYYFEIAVAL AVAAIPEGLP AVITTCLALG TRKMAAKNAL 360
  361 VRKLPSVETL GCTTVICSDK TGTLTTNQMS VAKLVAIGDA EGKVRSFKVD GTTYDPRDGR 420
  421 IHDWPAGRMD ANLQTIAKIS AVCNDASVAH SSHQYTATGM PTEAALKVLV EKMGIPEGMN 480
  481 GLSLDPSETL GCCQWWSNVA KRIATLEFDR TRKSMGVIVK SKSGRNALLV KGAVENLLER 540
  541 SSHIQLQDGS VVPLDEKSRK AILENLHEMS IKALRCLGFA YKEDLAEFAS YDGENHPAHK 600
  601 LLLDPVNYAA IETNLIFTGL AGLRDPPREE VFDAIEDCRA AGIRVMVITG DNKETAEAIC 660
  661 REIGVFSHDE DITLKSLTGK EFMALEDKKT LLRRKGGLLF SRAEPRHKQE IVRLLKEDGE 720
  721 VVAMTGDGVN DAPALKLADI GVAMGITGTE VAKEASDMVL ADDNFSTIVA AVGEGRSIYN 780
  781 NMKAFIRYMI SSNIGEVASI FLTSALGIPE GLIPVQLLWV NLVTDGPPAT ALGFNPPDKD 840
  841 IMKKPPRKSD DSLITPWILF RYLVIGLYVG IATVGIFVIW YTHGSFMGID LTGDGHTLVS 900
  901 YSQLSNWGQC STWNNFTVTP FTAGARTFTF DDNPCEYFHG GKVKATTLSL SVLVAIEMFN 960
  961 SLNALSEDTS LLRMPPWVNP WLLLAMSVSF GLHFLILYVP FLAQVFGIVP LSLNEWLLVL1020
 1021 LVALPVVLID EVLKFVGRCT SSSGPKRRTR KQKGE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle