YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14719338
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATAAPPAAS GARRLGRPRA GLRVGAVAAA EGPSCLYVGP IETASQEMLE ALYHQARDSY  60
   61 YSGQPLIVDD MFDKVELKLR VYGSPSVVKY PRCSLKRQST YADAEEDKSM FMALSSIWML 120
  121 LLLFGTSAFL VPSLCILSLT FGDAFGARYL LYGAKSFDVI TRVNDMVLIG LGYLIGYPIS 180
  181 SASVGALQGL LTNNLVALKG SCPNCGEQVF AFVKTDNSIK APHRAECHVC SCPLEYRTKV 240
  241 EKSLSGTRRT WVYGRVYLVK QGHPRKRKWL KD

Type	Start	End	Confidence
Cytoplasmic	1	117	0.80
Transmembrane Helix	118	141	0.91
Non-Cytoplasmic	142	168	0.70
Transmembrane Helix	169	191	0.74
Cytoplasmic	192	272	0.79