YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|38197008
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EVEGDNRYIA NTVELRVKIS TEVGITNVDL STVDKDQSIA PKTTRVTYPA KAKGTFIADS  60
   61 HQNFALFFQL VDVNTGAELT PHQTFVRLHN QKTGQEVVFV AEPDNKNVYK FELDTSERKI 120
  121 EFDSASGTYT LYLIIGDATL KNPILWNVAD VVIKFPEEEA PSTVLSQNLF TPKQEIQHLF 180
  181 REPEKRPPTV VSNTFTALIL SPLLLLFALW IRIGANVSNF IFAPSTIIFH LGHAAMLGLM 240
  241 YVYWTQLNMF QTLKYLAILG SVTFLAGNRM LAQQAVKRTA H

Type	Start	End	Confidence
Non-Cytoplasmic	1	189	0.59
Transmembrane Helix	190	213	0.86
Cytoplasmic	214	219	0.51
Transmembrane Helix	220	244	0.84
Non-Cytoplasmic	245	251	0.53
Transmembrane Helix	252	272	0.81
Cytoplasmic	273	281	0.70