YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|5712722
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKATALGNPA SKTGSECSFT TSKLRFLACF FLVFPSLVTL SRRLAAPCNT HLPCVQSRTL  60
   61 NFLGSTCLTQ LHSGRPSHAA MPANTSSYKA LGEQDYRRNT MSYAVIVTGG KQYKVAPGEY 120
  121 LKIEKLEIAT GESVTFDRVL LVANGDDVNI GAPVVAGATV VAEVISQGRH DKVRIIKFRR 180
  181 RKHHMKRMGH RQWYTEIKIT GIQA

Type	Start	End	Confidence
Signal Peptide	1	45	0.92
N-region	1	36
H-region	37	42
C-region	43	45
Cleavage Site	45	46
Non-Cytoplasmic	46	204	0.99