YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|38233514
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFTKRRAVP VVNREEKPRG LKLSRPSMKV DGRWLVIYGT IVIVLCVAIL RPLNTYMDQK  60
   61 AEAARLKASI AEKQIEKERL LAELEKYDSE AYVKEQARKR LGVIAPGEKA YRVMTPELEN 120
  121 QGSHVSTKEE TKAKNPWYEK LWDSVTIVEP AEEAEQQGDQ PQMNLPLIPA DPPSEQP

Type	Start	End	Confidence
Cytoplasmic	1	33	0.64
Transmembrane Helix	34	53	0.86
Non-Cytoplasmic	54	177	0.74