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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15459699, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFASKSERKV HYSIRKFSIG VASVAVASLV MGSVVHATEN EGSTQAATSS NMAKTEHRKA  60
   61 AKQVVDEYIE KMLREIQLDR RKHTQNVALN IKLSAIKTKY LRELNVLEEK SKDELPSEIK 120
  121 AKLDAAFEKF KKDTLKPGEK VAEAKKKVEE AKKKAEDQKE EDRRNYPTNT YKTLELEIAE 180
  181 FDVKVKEAEL ELVKEEAKES RNEGTIKQAK EKVESKKAEA TRLENIKTDR KKAEEEAKRK 240
  241 ADAKLKEANV ATSDQGKPKG RAKRGVPGEL ATPDKKENDA KSSDSSVGEE TLPSSSLKSG 300
  301 KKVAEAEKKV EEAEKKAKDQ KEEDRRNYPT NTYKTLDLEI AESDVKVKEA ELELVKEEAK 360
  361 EPRDEEKIKQ AKAKVESKKA EATRLENIKT DRKKAEEEAK RKAAEEDKVK EKPAEQPQPA 420
  421 PATQPEKPAP KPEKPAEQPK AEKTDDQQAE EDYARRSEEE YNRLTQQQPP KTEKPAQPST 480
  481 PKTGWKQENG MWYFYNTDGS MATGWLQNNG SWYYLNANGA MATGWLQNNG SWYYLNANGS 540
  541 MATGWLQNNG SWYYLNANGA MATGWLQYNG SWYYLNSNGA MATGWLQYNG SWYYLNANGD 600
  601 MATGWLQNNG SWYYLNANGD MATGWLQYNG SWYYLNANGD MATGWVKDGD TWYYLEASGA 660
  661 MKASQWFKVS DKWYYVNGSG ALAVNTTVDG YGVNANGEWV N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle