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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25509365
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTTILSLT TAAVILAAYV PNEPILAAYV PNEPILADTP SSEVIKETKV GSIIQQNNIK  60
   61 YKVLTVEGNI GTVQVGNGVT PVEFEAGQDG KPFTIPTKIT VGDKVFTVTE VASQAFSYYP 120
  121 DETGRIVYYP SSITIPSSIK KIQKKGFHGS KAKTIIFDKG SQLEKIEDRA FDFSELEEIE 180
  181 LPASLEYIGT SAFSFSQKLK KLTFSSSSKL ELISHEAFAN LSNLEKLTLP KSVKTLGSNL 240
  241 FRLTTSLKHV DVEEGNESFA SVDGVLFSKD KTQLIYYPSQ KNDESYKTPK ETKELASYSF 300
  301 NKNSYLKKLE LNEGLEKIGT FAFADAIKLE EISLPNSLET IERLAFYGNL ELKELILPDN 360
  361 VKNFGKHVMN GLPKFLTLSG NNINSLPSFF LSGVLDSLKE IHIKNKSTEF SVKKDTFAIP 420
  421 ETVKFYVTSE HIKDVLKSNL STSNDIIVEK VDNIKQETDV AKPKKNSNQG VVGWVKDKGL 480
  481 WYYLNESGSM ATGWVKDKGL WYYLNESGSM ATGWVKDKGL WYYLNESGSM ATGWVKDKGL 540
  541 WYYLNESGSM ATGWVKDKGL WYYLNESGSM ATGWVKDKGL WYYLNESGSM ATGWVKDKGL 600
  601 WYYLNESGSM ATGWVKDKGL WYYLNESGSM ATGWVKDKGL WYYLNESGSM ATGWVKVSGK 660
  661 WYYTYNSGDL LVNTTTPDGY RVNANGEWVG 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle