YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25388162, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSLRFQSVF DIIGPVMIGP SSSHTAGAVR IGKIVSSIFD DTPTEVEFQL FNSFAKTYRG  60
   61 HGTDLALVAG ILGMDTDDPE IPNSLEIAHK RGIKIVWTIQ KDSNAPHPNT TKITVKNAHK 120
  121 TISVTGISIG GGNIQVTELN GFAVSLNMNT PTIIIVHQDI PGMIALVTEA LSRYGINIAQ 180
  181 MNVTREKAGE KAIMIIEVDS RNCDEAIEEI RKIPHLHNVN FFK

Type	Start	End	Confidence
Signal Peptide	1	25	0.58
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	223	0.98