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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55716039, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRLPAVSRA LAAHSKGSIA TTNNVRTSVR AASNMVEVFV DGKPVMVEPG TTVLQACEKV  60
   61 GVQIPRFCYH DRLSVAGNCR MCLVEIERAP KPVAACAMPV MKGWNILTNS EKTRKAREGV 120
  121 MEFLLANHPL DCPICDQGGE CDLQDQSMMF GTDRSRFTEG KRAVEDKNIG PLIKTIMTRC 180
  181 IQCTRCVRFA SEVAGVEDLG TTGRGNDMQI GTYVEKMFMS ELSGNIIDLC PVGALTSKPY 240
  241 AFTARPWETR KTESIDVLDA VGSNIVVSTR SGEVMRILPR MNEDVNEEWI SDKTRFAYDG 300
  301 LKRQRLTQPM VRDASGQLVS TTWEDVLTRV AGALQGVKGS EIGAIAGGMV DAEALVALKD 360
  361 LLNKLDSESL CTEEIFPMAG AGSDLRSNYL LNSRITGIEE CDLLLLIGTN PRYEAPLFNA 420
  421 RIRKSWLHNE LQVAMVGHDV DLSYSYNHLG ETTQVLQDIA AGTHPFCKDL GQAKKPIVVV 480
  481 GSSALQRDDG AAILKAVSTI AQNARASSGV EEGWKVLNVL HRVASQVAAL DLGYKPGVDA 540
  541 IRKNPPKVLF LLGADAGCIT RADLPKDSFI VYQGHHGDVG APIADVILPG AAYTEKFGTY 600
  601 VNTEGRAQQT RVAVTAPGMA REDWKILRAV SELAGVTLPY DTLDEVRRRL AEVSPNLVRY 660
  661 DDVEEANYFK QAHELSNAVN QSLLAAPLVP PQLTVKDFYM TDPISRASPT MAKCVKAVTE 720
  721 GAAAVDEPSI C

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle