YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55715840, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLVLLRACL LTLSLCSPAE DDGLVQEKLF LSSMGLWSRP KPSHHAAVPS QMWKIFKQAS  60
   61 KQTVNDPCVV SEYGVRGNIV RFMQDQGSLI SAPAVHCFNC VRKHLFFNMS VLEEVEQLSL 120
  121 AQLEMKFKQD LLLLGPHVFS VDLYRVLKTT LKGVTHESSR KLLQSQTLSP GAHASVLVNL 180
  181 TNLAQSWRKP EKNFGMQLEL QVMHLNNMLH DHAYVQIPDI HATLVVVSLN PLQCRSRRKR 240
  241 SASYYLPVTP SNVCKPRRLY IDFKDVGWQD WIIAPQGYLA NYCHGECPFP LSESLNGTNH 300
  301 AILQTLVHSF DPKGTPQPCC VPIKLSPISM LYYDNNDNVV LRHYEDMVVD ECGCR

Type	Start	End	Confidence
Signal Peptide	1	19	0.98
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	355	0.99