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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25401884
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLFFALAM MLATVTAFLV APSVKAETTV KIASDSSYAP FEFQNGQKKW VGIDVDIMQE  60
   61 VAKINDWKLE MSYPGFDAAL QNLKAGQVDG IIAGMTITDE RKETFDFSNP YYTSALTIAT 120
  121 TKDSKLSDYS DLKGKAVGAK NGTAAQTWLQ ENQKKYGYTI KTYSDGVHMF AALSSGNIAG 180
  181 AMDEVPVISY AMKQGQDLAM NFPSISLPGG YGFAVMKGKN STLVDGFNKA LAEMKSNGDY 240
  241 DKILKKYGIT ATKKATPKKD VYTIASDNSF APFEFQNDDK QFTGIDVDLL NAIAKNQGFK 300
  301 LKWNFIGFQA AVDSVQSGHA DGMMSGMSIT DARKQVFDYG SPYYSSNLTI ATSSTDDSIK 360
  361 SWKDLKGKTL GAKNGTASFD YLNAHAKEYG YTVKTFTDAT TMYSSLNNGS INALMDDEPV 420
  421 IKYAIKQGQK FATPIKPIPD GQYGFAVKKG SNPELIEMFN NGLANLRANG EYDKIIDKYL 480
  481 ESDAKTIQSS AKENTFFGIL QNNWEQIGRG LLVTLELAIL SFILAMIVGI IFGLFSVAPS 540
  541 KILRTIARIY VDLNRSIPLL VLTIFIFYGI PNLLQIITGH QSPLNEFTAG VIALTLNSSA 600
  601 YIAEIVRSGV QAVPSGQMEA SRSLGVTYLT SMRKVILPQA IKITIPSLIN QFIITLKDTT 660
  661 LVSVIGLVEL LQTGQIIVAR NFQAFRVYGL IGLVYMIVLL FLMWIGRRVE KRMK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle