YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|10176515, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQRKHLLLL TMLLFALLVV AACGSNTDAE QADELESEDG MITYESETGP IEVPANPQRV  60
   61 VALGFTGNIL ALDVNVVGVD TWSKNNPNYE QLLQDVTEVS EENLEQIMEL DPDLIIAYST 120
  121 VQNAEQLQEI APTVLYTYNN LDYLEQHVEI GKLLNKEEEA QAWVDDFKAR AEQAGEEIKE 180
  181 KIGEDATVSV IETFEDQLYV FGNNWGRGTE ILYQTMDLAM PERVEEMALA DGYYALSFEA 240
  241 LPEFAGDYII LSKNDEADNS FQETNTYQSI PAVQNGQVFE ANAKEFYFND PLSLELQLEF 300
  301 FKEHFLSE

Type	Start	End	Confidence
Signal Peptide	1	24	0.98
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	308	0.99