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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25297714
Protein type: Transmembrane
Type Confidence: 0.58
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVVIQRKAR KRWRLFRLWL RLLLIVLVLG AGSAVSLLSY IKMQGPPPLQ VSQTTVLYGH  60
   61 DMSVIGEHHQ GQQRYWVALD EISPYLKEAT ISIEDRKFYQ HHGFDLTRIG GAVVANLRAG 120
  121 SMAQGASTIT QQYARNLYLG HDKTWNRKAQ EALYALRLEM HYTKDDILEG YLNTIYYGHG 180
  181 AYGIEAAAQH FFGKKAANLT LAEASMLAGV PKGPSYYSPL VDEDRAKARQ EIILQSMVEN 240
  241 GYITAQEAEE AINEALDYVT DGGMRSETIG PYFQDVVEEQ LVEEVGLDPA LLESGGLHIY 300
  301 TTLDPHMQEE AERWVEVEMP DSDLQVALVA IDPSTGDVRA LVGGKNYGES SFNRATKARR 360
  361 SPGSSFKPFL YYAALEQGFT PASTLISEPT TFSYDQGRST YSPRNFQDRY KDDFVTLLQA 420
  421 LAFSDNIFAV KTHMFLGTDE LVETARRFGI ESPLRDIPSL ALGTLPVGVL ELTKSYVPFA 480
  481 NNGFTVEPRF ITKVVDRDGN VLYEQMPETE QTLDPRLTFI MADLMTAMFD PSLNDYMSVT 540
  541 GSSVNHLVNR PVAGKSGSTS TDSWMVGFTP QLVTGVWIGY DQSETLNHGT EGQVAKRIWA 600
  601 NFTEHALENE LMLQFRQPPG VVSVNMNPSN GFLANDVCPN GRKTFFVEGT EPTEGCPEEA 660
  661 RDNETDAIDE ENHEKERFLD RFIRWFH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle