YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25487769
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKRILSFFV AVVMVITMFT VPTVSAQTNP NSKGDQQKMI NIAHRGASGH APENTMAAFQ  60
   61 KGFDMKVDYI EFDVHMTKDG ELVLMHDLTV DRTTNGHGYV SDLTLDEIKQ FDAGSWFHED 120
  121 FVGEKVPTFE ETLDVFRGKV GLLIELKSPE RYPGMEEKVA EALKERKMDR SSNHKVIIQS 180
  181 FNHESMKKSK ELLPHIPHGV LAGPSWANVT DEQLEEFSTY ADYFNPNMTI VTPELVSRIH 240
  241 AVGMKIFPYT SRTQEQANRL FELKVDGIIT DFPEHVYFHP VKNQ

Type	Start	End	Confidence
Signal Peptide	1	26	0.99
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	284	0.99