YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|10176276, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHVKKAIIPA AGLGTRFLPA TKAQPKEMLP IVDKPTIQYI IEEAIESGIE DIIVVTGRGK  60
   61 RAIEDHFDKS FELEETLEKK NKSKLLEEVK AISSMTNIHY IRQKEANGLG HAIWCARKFI 120
  121 GNEPFAVLLG DDIVQSDVPC LKQLIDVFDR YHSSVVGVQE VPNEDVSKYG IVSPKGSEIE 180
  181 ANVIHAAGFV EKPKLEEAPS NYAIMGRYVL RPEIFDILEN LPPGAGGEIQ LTDAIKVLNE 240
  241 SQVVLAYNFD GVRYDVGDKF GFIKATIDLA LQRDDLSEDV AQYIKDIYEK QVGQLKQ

Type	Start	End	Confidence
Signal Peptide	1	23	0.83
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	297	0.99