YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15616209, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPSRKVQRK KRKAVRFLKI FMTMTLLALL AFTCLGVYVY FKVSSVASES TVDLERGDKS  60
   61 EKRIEAVDPS KDNFSVLLLG DDSRPGEARA RTDAMLVATF NKEDQSIILT SIPRDSRVEI 120
  121 VGRGHLDKIN HAHAYGGIDM TIDTVEHLLD IPIDYYGIVR FQGLIDIVDA LGGIEVEVPF 180
  181 DFEEKDTNND WIQFQEGLHT LDGEEALAFA RMRKHPQGGG DLGRGQRQQQ VIEGIIKKAA 240
  241 SFSSITRFDD VLDALGENIQ MNFTFNNLVA LHSYASSISE IETLQLQGTD LMLNGIYYYE 300
  301 LDQGSLFEIQ TRLKKHLEID GHTNDGLDEV QPEPDMWNPN EQQQPVEQPN EESNEVFYN

Type	Start	End	Confidence
Signal Peptide	1	36	0.72
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	359	0.99