YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FENR_BACHD
Protein type:	Transmembrane
Type Confidence:	0.72
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRKEELYDI TIIGGGPTGL FAAFYGGMRQ AKVKIIESMP QLGGQLAALY PEKYIYDVAG  60
   61 FPKVKAQDLV NDLKRQAEQF NPTIALEQSV QNVTKETDDT FTIKTDKETH YSKAIIITAG 120
  121 AGAFQPRRLE VEGAKQYEGK NLQYFVNDLN AYAGKNVLIS GGGDSAVDWA LMLEPVAKNV 180
  181 TLIHRRDKFR AHEHSVELLQ KSSVNILTPF AISELSGDGE KIHHVTIQEV KGDAVETLDV 240
  241 DEVIVNFGFV SSLGPIKGWG LEIEKNSIVV NTKMETNIPG IYAAGDICTY PGKVKLIATG 300
  301 FGEAPTAVNN AKAFIDPTAR VFPGHSTSLF

Type	Start	End	Confidence
Cytoplasmic	1	6	0.66
Transmembrane Helix	7	28	0.66
Non-Cytoplasmic	29	330	0.94