YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25332308
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRRKRQPEK GAPRWMVTFS DLMTLILVFF ILLFSMSVVD AQKFRAIAES FQQRQVFEFL  60
   61 PSAIDFESPK EDRGEERKEP FDEGEYGDEQ KDEVDLDELL AEVEEFLEEN ELTEQISATR 120
  121 DDRGVVLILQ EQALFETGEA EVLPGARPFL DKVGTLVELI PNIVKVEGHT DNRPISTYRY 180
  181 PSNWELSGAR ASSVIRYIID HHNVDPSRFI ATGFGDTRPV VPNTTEENLQ QNRRVIIVIS 240
  241 DPTTNPDDTF

Type	Start	End	Confidence
Signal Peptide	1	41	0.68
N-region	1	32
H-region	33	38
C-region	39	41
Cleavage Site	41	42
Non-Cytoplasmic	42	250	0.99