YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25284588
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAENREFFNR RLHSLLGVIP IGIFLIQHFV VNHFATAGAS AFNQAAHFME SLPFRYALEI  60
   61 FIIFIPILYH AIYGLYIAFQ AKNNTSHYGY FRNWMFLLQR ISGVFLLIFI AWHVWETRIQ 120
  121 AAFGAEVNYD MMADILSNPF MLVFYILGVV SATFHFANGL WSFFVSWGIT VSPRSQQIMT 180
  181 YVTVAIFFAL TFVGIRAILA FINPDLANI

Type	Start	End	Confidence
Cytoplasmic	1	11	0.94
Transmembrane Helix	12	31	0.92
Non-Cytoplasmic	32	55	0.84
Transmembrane Helix	56	77	0.92
Cytoplasmic	78	95	0.86
Transmembrane Helix	96	115	0.95
Non-Cytoplasmic	116	140	0.93
Transmembrane Helix	141	165	0.86
Cytoplasmic	166	177	0.87
Transmembrane Helix	178	200	0.92
Non-Cytoplasmic	201	209	0.88