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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15615135, gi|...
Protein type: Transmembrane
Type Confidence: 0.64
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVSNVTVRR RLIFVLLVGL ATFLIIMLRL GYVQFALGDW LTGQAQDSWS RDVPFEAKRG  60
   61 EITDRNDVVL ATNVSAPSIL VVPRQVKDPA ETAEKLANVL QMDRQKAYEL ITKRESIVRL 120
  121 NPEGRKISKD KANEVRKLRL PGVYIAEDSK RHYPFGSYLS HVLGFAGIDN QGLTGLELYY 180
  181 DEQLKGEKGH VSFFSDAKGQ RLPNLADEYT APINGLNLRL TIDSRVQTII ERELDIAEAT 240
  241 YSPDGAIAIA MNPNTGEILG MSSRPHYNPE NFREVPPEVY NQNKPIWMQY EPGSTFKIIT 300
  301 LAAALEENEV DLTNDRFHDP GFIEVAGHRL RCWKKGGHGS QTFLEVVENS CNPGFVVLGE 360
  361 RLGKDRLFDY IEAFGFGQKT GIDLQGEAKG IIFNRDRIGP LEQATTAFGQ GVSVTPIQQV 420
  421 AAVSAAVNGG YLYEPYVAKD WVDPYTGEVV ESSAPKMKRQ IISEETSKEV RYALESVVAR 480
  481 GTGQGAFVDG YRVGGKTGTA QKAKDGRYLE NNHIVSFIGF APADDPQIVV YVAIDNPKDT 540
  541 VQFGGVVAAP IVGKIIGDSL QALGIEKREN QIEKERKWND EPLVEVPDLV GRTKRDLHES 600
  601 YYELKIDADG KGDVVVAQAP EPGTKVAVGS TIRLYMDDDT EPTD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle