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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|10175115, gi|...
Protein type: Transmembrane
Type Confidence: 0.63
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVRGIGDET AKQLASLQLY SVFDLLEHFP FRYEDYQVRP IEEIKHDERA TVVGTVQSEP  60
   61 TVRYYGKKKN RMSVRVLVGH VLLTAVFFNR AFLKQQLKVG QEVTLTGKWD QHRLTLTVNE 120
  121 VKQGNHTERA TVEPIYSVSG KLTSKTLKKY IHVALRQFGE QITDPLPPEI RERYKLVSKR 180
  181 EAVFHLHMPS DREALKQARR RMVYEEFLFF QLKMQAFRKV NREQSNGRAV KVNEQKVDQF 240
  241 IAALPFSLTE AQEKVAGEIL TDMSSPYRMN RLLQGDVGSG KTVVAAICMF AAVTAGKQAA 300
  301 LMVPTEILAE QHAQSLERLF APSGVRLTLL TGSVKGKRRQ AAVTAVKAGD VDVVIGTHAL 360
  361 IQDDVAFHDL GLVITDEQHR FGVEQRRALR DKGAYPDVLF MTATPIPRTL AISAFGDMDV 420
  421 SIINQMPAGR KEIETYWAKH DMLTRVLDFM EKELAKGRQA YVICPLIEES EKLDVQNAID 480
  481 VHSILQQHFE PRFQVGLMHG RLHPSEKDTV MTAFSENKIR ILVSTTVVEV GVNVPNATIM 540
  541 VIYDAERFGL AQLHQLRGRV GRGEHQSYCI LLADPKSEVG KERMRIMTET NDGFTLSERD 600
  601 LELRGPGDFF GAKQSGLPDF KVADVVHDYR ALETARQDAA TLVNSKTFWS DPKYRELVTY 660
  661 LQAEGVLDGE KLD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle