YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25490444
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKILIHGCV FAIILLMTYG AVQNPFSSQY IGQLKEEALP VAKMTDSLYE EIKDRAPEYE  60
   61 QPAIDAKIDR VWKAIPGYNG LEVDVESSYN RMKQEGRFDE RYLVFRETKP SVHLDDLPPS 120
  121 PVFRGNPEKP MVTLLVNVAW GNEHLPTMLK TMNKYDVKST FFLDGSWVKK HPQLATMIVE 180
  181 EGHEIGNHAY SHPDMQRLTR ERMDEEIVQT NEVIKATIEV TPKWFAPPSG SYNDLVVQRA 240
  241 AEHGMRTIMW SVDTIDWRNP DPNEMVDRVL SKVHPGAMIL MHPTESSAAG LENLIRGIQD 300
  301 RGLHIGTVSD LMDESRINAG VTP

Type	Start	End	Confidence
Signal Peptide	1	20	0.90
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	323	0.99