YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15614693, gi\|...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.62
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPMKILKIIS KSMTFLLFLL MISVAMLSII SHASGGKPTV FGHQLNVVLS GSMEPAFHTG  60
   61 SIIAVKQVEG NGTGFQAGDV ITFLKEDNTL VTHRIVEVLQ NGDHVQYVTK GDNNDAADLE 120
  121 PVLAANVVGE YTGFTVPYLG YILTFATTKE GTALLMIVPG VLLILYSIIT LWRAIGTLEK 180
  181 RQEQKQVDQT S

Type	Start	End	Confidence
Signal Peptide	1	33	0.70
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	152	0.95
Transmembrane Helix	153	175	0.84
Cytoplasmic	176	191	0.85