YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25352755
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFVTSYSIS VKRLVTFIVA TMALMMVLVS FLVSNTYFHS QKVHRGMELV TSEMLLSMMG  60
   61 TENPYFTTAL PEGYEPPSMA TISFEMATSI EMGDIRSLLG RELPGLALFD TRIIVAGEGT 120
  121 NLSNMPFESP PPMEVLLEER EAVMESSDEE EADTESTPDT ERQTDSTRVF IHHTHSWESF 180
  181 LPHLPGVENP NQATHNEMNI IKVGERLGDA LEKHGIQAAV DKTDMTALLH ERNVRPSRAY 240
  241 EVSREIVQEA IKEHDDLSFI FDLHRDSVRR DDTTVTINGK EYAQVLFVIG ESHPDYEKNL 300
  301 ELATKLHEKV EEKYPGLSRG VFGRDRSSGN GVYNQDLSDQ SILIEFGGVD NHIDELNRSA 360
  361 DAFAEVFADY FWTLEDG

Type	Start	End	Confidence
Cytoplasmic	1	13	0.72
Transmembrane Helix	14	33	0.82
Non-Cytoplasmic	34	377	0.91