YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15614373, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKWGFLLFL SVGLGIAFVF IIPSFQKHAE IQEYHPNDTW EDEESSEDTQ QKEITEDQIK  60
   61 QGDLLLVNSE HPADERGIKS DIINLSMDKE LTQGYVLLDY DIYLSEDVAR RFSEMVAAAQ 120
  121 KEGVSHFLVS SGFRDFEEQR ELYEERGAAY ALPAGHSEHN LGLALDVGST QTSMYEAAEA 180
  181 EWIKENAWKH GFILRYPQDK VDITGIEYEP WHLRYVGLPH SAIMKEKNFV LEEYLEYLRE 240
  241 KKRVSVEVEG EKYTVAYYPI SENLTIHIPK NREYEISGNN VDGVIMTIHE

Type	Start	End	Confidence
Signal Peptide	1	29	0.77
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	290	0.99