YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25489938
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDFIKRLFI ALAIGTCIGI MFIGTSTASA EEKAISPIHI WPTVGEITDT FGTRGGTHHG  60
   61 IDIAAPVGTP VISIADGMVR KSYYSDSYGH VIFVEHDHGL ETVYAHLNER FVEEGDTVKE 120
  121 GEQIGTVGNT GRSSGPHLHF EVHKDEWNVE KSNAIDPFLV LADERDYMYA AVDDSWKDGK 180
  181 EEESTYAFKN KFTNEDEDEL EEIELLENQQ VFTVSKGDTL WGIAQKHEMS VETLMEINGL 240
  241 NDTLIHPGDD LIVLLDDEES HVVKTGDTLY RIALNHQLTV EELQANNDLT DELIFPGQVL 300
  301 ALK

Type	Start	End	Confidence
Signal Peptide	1	30	0.85
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	303	0.99