YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15614137, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINYIWVGML VIGIVFAAIN GTMEEVNEAI FTGAKEAVAI CIGLISILVF WLGLMRVAQQ  60
   61 AGLLKGLSRL MRPVAKRLFP EVPPDHPAMG YILSNMSANM FGLGNAATPM GIKAMEQLKE 120
  121 LNGGKDSASR SMITLLAINT ASITLIPTTV ISIRMNYGSV SPTDIVGTTL VATACSTVGA 180
  181 IAIDRFFYYR RVRKGRE

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.70
Transmembrane Helix	5	23	0.92
Cytoplasmic	24	36	0.61
Transmembrane Helix	37	55	0.94
Non-Cytoplasmic	56	87	0.75
Transmembrane Helix	88	112	0.68
Cytoplasmic	113	131	0.93
Transmembrane Helix	132	153	0.91
Non-Cytoplasmic	154	164	0.87
Transmembrane Helix	165	188	0.90
Cytoplasmic	189	197	0.96