YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15612806, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFFWVLRAK KIKQLTIILL TAFFCASLLY LERSHLMVFS TPEGPQAFHK AETDEKVAAL  60
   61 TFNISWGEQR VKPIIDVLQS KKVEEATFFI SASWAERHPE LVELIQEAGY HIGSHGYQYK 120
  121 NYTTWEDEKI RKDLRQSQQV ISSITGEKPT LLRPPNGDFD KRVLNLAESY DYTVVHWSIN 180
  181 SRDYENPGVD AIVRQVVDHI SPGDIVLMHA SDSAKQTHKA LPIIIDQLKG KGYHFRSIEE 240
  241 LMADAHPTHD EIK

Type	Start	End	Confidence
Signal Peptide	1	31	0.82
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	253	0.99