YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157080570, gi...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMLFSARDR YNSSGQHPRS TDEFIMIRNV LLAFMICSGM TLLGGCSSVM SHTGGKEGTY  60
   61 PGTRASATMI GDDETNWGTK SLAILDMPFT AVMDTLLLPW DVFRKDSSVR SRVEKSEANA 120
  121 QATNAVIPPA RMPDN

Type	Start	End	Confidence
Cytoplasmic	1	24	0.85
Transmembrane Helix	25	51	0.76
Non-Cytoplasmic	52	81	0.86
Transmembrane Helix	82	103	0.57
Cytoplasmic	104	135	0.73