YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|254162517, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGAWRGARV CITFKSHYLA KGLVMNTLRY FDFGAARPVL LLIARIAVVL IFIIFGFPKM  60
   61 MGFDGTVQYM ASLGAPMPML AAIIAVVMEV PAAILIVLGF FTRPLAVLFI FYTLGTAVIG 120
  121 HHYWDMTGDA VGPNMINFWK NVSIAGAFLL LAITGPGAIS LDRR

Type	Start	End	Confidence
Cytoplasmic	1	38	0.93
Transmembrane Helix	39	58	0.92
Non-Cytoplasmic	59	76	0.79
Transmembrane Helix	77	98	0.87
Cytoplasmic	99	104	0.66
Transmembrane Helix	105	124	0.91
Non-Cytoplasmic	125	141	0.86
Transmembrane Helix	142	161	0.93
Cytoplasmic	162	164	0.89