YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	crls-1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRNFSSLEQ KQSPKIESLP PEERGKYKVA TIPNAICTAR IAATPLIGYL VVQHNFTPAF  60
   61 VLFTVAGATD LLDGFIARNV PGQKSLLGSV LDPVADKLLI STMFITMTYA GLIPLPLTSV 120
  121 VILRDICLIG GGFYKRYQVM SPPYSLSRFF NPQVSSMQVV PTMMSKINTV LQITLVALSL 180
  181 SSPVFDFSTG ANDVIVGLGC ITGFTTIYSG LQYASGKAIK KI

Type	Start	End	Confidence
Cytoplasmic	1	35	0.86
Transmembrane Helix	36	68	0.53
Non-Cytoplasmic	69	97	0.62
Transmembrane Helix	98	128	0.62
Cytoplasmic	129	166	0.70
Transmembrane Helix	167	185	0.69
Non-Cytoplasmic	186	193	0.69
Transmembrane Helix	194	214	0.87
Cytoplasmic	215	222	0.87