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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: nhr-66
Protein type: Globular with Signal Peptide
Type Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPQIGLTGL GSLTSLPPEL LLQFARLDGF NLLPAVGSPA IPSSSSCSEP STSQASTVVS  60
   61 APTLPPPSPL TSLPQKPAPL MPSGHVTTVD QQNRQQHQQQ QRQQQQAQQQ NSMARKYSMD 120
  121 TIQHHTMQHP HQLQYIPNHF MTASTDVFAA MDMSQKQSSP PGIFKIVAAK NEPSSSSNSQ 180
  181 PGTPAMGDRR AVPACAICGT DSTGIHFGVD ACAACSAFFR RTVVLNKDYS CNKGGKCTVV 240
  241 KDGSAGQKCR ACRFRKCISS GMDKNSVQHR RDAIGKYSAG VKRELSPDAE FEPSAKVSTV 300
  301 SEPSTSSGPS GGFNQNVSSP AGIPRVPSTL RTTQASTCMN SACGQKSVLH ELICRQNFLT 360
  361 EQRQLFYAGC LGDWFRKPSS IENQTLSELT DFSSCMFHLW KIEPRLAADF MNRNRYLDPL 420
  421 PIVEKLKIYR NFVIMRQSVE EPYLTWRHGG LEKRWFVMPN NTYIDFNNIA KYFENGALKD 480
  481 LKLDYETTTN LFLPSFTHAM DTIGEKMKKN NITETELTIL LGLVLLDPGI YGIHESTRKF 540
  541 LKRIRDQLIH DVYMYYEDEM SHLYDPEIRM ADIFMLVAAI KIHSIKTSEN MHMLRVFDLI 600
  601 PADACFNQML DVESVNVSPD GQKDSEAEQG PSPVSVPEAA RGSYQDDDMP PVLEKNCDL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle