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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38197485
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTQGPELSLD PDPCSPQSTP GLMKGNKLEE QDPRPLQPIP GLMEGNKLEE QDSSPPQSTP  60
   61 GLMKGNKREE QGLGPEPAAP QQPTAEEEAL IEFHRSYREL FEFFCNNTTI HGAIRLVCSQ 120
  121 HNRMKTAFWA VLWLCTFGMM YWQFGLLFGE YFSYPVSLNI NLNSDKLVFP AVTICTLNPY 180
  181 RYPEIKEELE ELDRITEQTL FDLYKYSSFT TLVAGSRSRR DLRGTLPHPL QRLRVPPPPH 240
  241 GARRARSVAS SLRDNNPQVD WKDWKIGFQL CNQNKSDCFY QTYSSGVDAV REWYRFHYIN 300
  301 ILSRLPETLP SLEEDTLGNF IFACRFNQVS CNQANYSHFH HPMYGNCYTF NDKNNSNLWM 360
  361 SSMPGINNGL SLMLRAEQND FIPLLSTVTG ARVMVHGQDE PAFMDDGGFN LRPGVETSIS 420
  421 MRKETLDRLG GDYGDCTKNG SDVPVENLYP SKYTQQVCIH SCFQESMIKE CGCAYIFYPR 480
  481 PQNVEYCDYR KHSSWGYCYY KLQVDFSSDH LGCFTKCRKP CSVTSYQLSA GYSRWPSVTS 540
  541 QEWVFQMLSR QNNYTVNNKR NGVAKVNIFF KELNYKTNSE SPSVTMVTLL SNLGSQWSLW 600
  601 FGSSVLSVVE MAELVFDLLV IMFLMLLRRF RSRYWSPGRG GRGAQEVAST LASSPPSHFC 660
  661 PHPMSLSLSQ PGPAPSPALT APPPAYATLG PRPSPGGSAG ASSSTCPLGG P

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle