YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15026783, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKYFKSALR LGIVLIIICG LIYPLFITAV GQTVFHNKAN GSIVTFKGKE VGSALLGQNF  60
   61 TDKRFFRGRV SSVNYNTYTK NDSNKDEVAS GSQNLAPSNK DLKNRVKKDI DDFLKTHPGV 120
  121 KKDEIPTDLL TSSGSGLDPD ISPKAAEIQV PSVSKATGIS QSKLKQIIKK CTEGRTLGVL 180
  181 GEERVNVLKV NLEVASMLKN SKIGE

Type	Start	End	Confidence
Cytoplasmic	1	8	0.82
Transmembrane Helix	9	30	0.82
Non-Cytoplasmic	31	205	0.96