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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25497672
Protein type: Globular with Signal Peptide
Type Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRELKFKHLL STLVCFISFS IFIPLNTYKA DTINTTNIGV TYDAHVQNIG WQTPWAKDGE  60
   61 TAGTDGKGLR IEALKLNLVN APADAKILYQ AHVQNIGWQN WYKDGEEAGT DGKGLRVEAI 120
  121 RIKLENMPDY SIEYQAHVQN IGWQNWVQDG EEAGTDGQGL RVEAIRIKIS KKVHPDSIKL 180
  181 NKNSENLKVG DTDTLSALFS PDTTTNKSLS WTSSDKSTVV VDDTGKITAL NEGTANITAA 240
  241 SLDGQKTDSC FVTVTKADSK IQYQAHVENV GWQYPVYDGN EAGTNGQGLR VEALKINLLN 300
  301 APIGAKIVYQ AHVQNVGWQT PVSNGEEAGT DGKGLRIEAI KMHLENMPGY LVEYQAHVQN 360
  361 IGWQDWTREG QEAGTDGKGL RIEAIRIRLI KAVPVDSITL SNSNYTLKVG DTYTLTATVN 420
  421 PGNATNKDIH WSSSDGSKVS VDGNGKITAL SEGTATITAS SSDDSKHVSC IVSVNGIVNN 480
  481 PVVFSDKNLE AAVRNSINKQ TGTLYESDVQ NISSLNANNA NITDLTGIEN LKSLDTLYLN 540
  541 SNSISNLTPL RSLINLQNLY LGNNKITDTT ALSSLSSLQR LDLYGNALNT FDGIKNLSNL 600
  601 TELDLSNTNL SSLAFLSVVT KLQNLNLSSN KIADISALSN LTNLNQLDLS TNQISNISSL 660
  661 NNLIGLNILN LNSNKINDIS SLTNLKQLQT LSLNSNTIQD IDVLKNFTVL NVLGLSNNKI 720
  721 TDISTLANLN SLKNISLSNN QITNISCLCN LTNAQYLHLE NNQINDISAL NKLKNLAYLY 780
  781 LNNNQITDIT ALGFLDKLNT LYLSYNKITK VDSLKNLTNL KILILAENNI TSTDQTSLKE 840
  841 SLPNCSIVY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle