YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25326086
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLIKKILTI AGSDCSGGAG IQADIKTITA HKMYAMSAIT ALTAQNTTGV YGIMEATPEF  60
   61 VEKQLECIFT DICPDAVKIG MVSSGEIINV IVKKLREYKA ENIVIDPVMV ATSGSKLLSD 120
  121 QAMEKLITCL LPLGTLITPN IPEAEVLCGF KIKSEQDMVR AAKKISEKIN VGILIKGGHL 180
  181 VDNATDLFYK NGYIEWFKLE KIDNPNTHGT GCTLSSAIAC NLAQGISISE SIKNAKEYLT 240
  241 GALRAGLDLG KGSGPLEHTY KLKNW

Type	Start	End	Confidence
Signal Peptide	1	23	0.78
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	265	0.99