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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25499162
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMKKCLVSC LLVALISIPP MKVFAANQTS MRIFEPNAQN NSIVSDFSLK TVDGQEVHIP  60
   61 NVDKSQQLDN KVKSTSQANY SQTKAVADEK ASTLINKDYG STSVQYALID NGKIVLSGNA 120
  121 GVYSKEDNKP VTADNMYGIG SVSKMFVTTA VMKLVDEGKI ELDAPVTKYI KEFKMADGRY 180
  181 KKITVRMLLN HSSGLMGSSF SNAILFGDND TYSHDTFLKQ LSKQRLKADP GAYSVYCNDG 240
  241 FSLAEILVER VAGVSYTTYI TNNITDILKM NNTKTPASKF DRNKLVKTYY DGVPNALPVE 300
  301 NLNSFGAGGV YSSAEDLCTF ANTFTKNSNG ILLKKALKAM ENKEYLRGIW PEGKDNILAY 360
  361 GLGWDSVNLY PFNQYNIKAL CKGGDSEFYH SGFIVLPEQN MAMAVVSSGG LSTYDEVMAE 420
  421 RVLLTALKEK GVIKNIIPDK TFTPPQETAV PSEIKKYEGS YLAPSGFINA KIDDAGKLTL 480
  481 LNTQNQPMQT YIYTKGGSFV SSDGSTSMKF VTERNGRIYL QETIYSNMKY LGQTVENLYI 540
  541 AQKEDGNKLK ENVAKAWEKR SGKRYVLLNE KYSSVEYMMG CPMALIAFTK GFEGYLGVDK 600
  601 IADKNLAVAI LDGPGVMSRD QQDYKLYKKN NLEYLSSNGG IYIDQDALKT LPIDGTFSST 660
  661 INKDGYAEWY KIGDEAAGKE INVDIPQNAA FAVYDSNGAV INDSLVTGST SAKLPQNGTI 720
  721 VFLGSPQAKF TIKYNTVLK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle