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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25497333
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METLKKNWTK FILSFIMLVL AIICVYTLST YKSSEKNTGF LKMGGGFNKS FNSSSRKLNG  60
   61 QPNMKGAPAQ HPSNSNANSK SAPPNNFNHN VSKPQRMMGG GEFNSSSKYS SEVLIYSLGF 120
  121 FAIVICAYLA IVKKKIKIST ENRGFILAAF LVIGFLFRII VGLLITGYVT DIGLYKQWAL 180
  181 TAAKNLAAVY TNGSVDYPPV YLYVLSIIGK IASSSFMSNY STLLIKLPSI IADIFSAYFV 240
  241 YRLSIKRFSY ETSFALTLFY LFNPAILINS TLWGQADSFF TLLVILAVYF ISEDKIVPSS 300
  301 IFFALSVLMK PQGIIFLPLV LFWYIKNKNL KSIFKSIASG FITTIIVLAP FSISKGNITW 360
  361 IFDLYTREVS EYPYASNNAF NFYSLIGANR VKDSNTMFIF SYHTWGMLFI VLITLISGFF 420
  421 YLKSKNKYAS TLAALIQVVG VFNFSVGMHE RYMFTAVLAS ILAYIYFKDK RLLLISLLLS 480
  481 FINYANMHTI LFNRLNMNVN SSSSMLIVFI SLLNITTFVY LIKVCFDLCL KKDIKVTEDI 540
  541 QNTL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle