YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15893597, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRKKHEEPE NSERWLLTYS DLITLLMAFF IVMYASSTVS KEKFAQIAQS LKVGFNGASG  60
   61 KTVIGNQDAV DIKSTSSYVT QEASKQSASA EKAEENKLKD VKKKIDQYVN QNGMQGSVST 120
  121 NLQEKGLVVS IVDTLMFDTG RAEVKPDFQK KLVEIGEILK TIDNYIRIEG HTDNTPISNS 180
  181 QYASNIELGS ARSNNVEHLF IDVSKIPVTQ MYTVSYADTR PVADNNSEAG KARNRRVDIV 240
  241 ILNSKFNAVE QESSGK

Type	Start	End	Confidence
Cytoplasmic	1	14	0.96
Transmembrane Helix	15	36	0.90
Non-Cytoplasmic	37	256	0.98