YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15076096
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMRTPLGKV RGLGSAKEGT DHFWRQRLTA VASIPLTIFF VVFLAHYAGA PHAELIAALS  60
   61 NPFVAVTMGL MVVAGLVHMK IGMQVIIEDY VHGEGAKIAL LMLNTFFTIA VGGLCLFAVL 120
  121 KIAFAG

Type	Start	End	Confidence
Cytoplasmic	1	27	0.92
Transmembrane Helix	28	49	0.91
Non-Cytoplasmic	50	56	0.77
Transmembrane Helix	57	79	0.89
Cytoplasmic	80	99	0.85
Transmembrane Helix	100	124	0.88
Non-Cytoplasmic	125	126	0.84