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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15966027
Protein type: Globular with Signal Peptide
Type Confidence: 0.36
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKPIPAKAR VVIIGGGVSG CSVAYHLAKL GWTDVVLLER KQLTCGTTWH AAGLIGQLRA  60
   61 SQNMTRLAKY SADLYVKLEA ETGIATGMRQ NGSITVALTE ERKEEIYRQA SLARAFNVDV 120
  121 REVTPDEVKE LYPHLNVSDV KAAVHLPLDG QCDPANIAMA LAKGARQNGA TIVEGVKVTS 180
  181 VLKKDGRITG VTCEQNGESF TIETENVVNC AGMWGRELAR QSGVTVPLHA CEHFYIVTEA 240
  241 IPGLSRLPVL RVPDECTYYK EDAGKMLIGA FELKAKPWGM EGIREDFCFD QLPEDFDHFA 300
  301 PILEMAVNRM PMLETAGIHT FFNGPESFTP DDRYYLGEAP ELKGYWVAAG YNSIGIVSSG 360
  361 GAGMALAQWM NDGEPPFDLW EVDIRRAQPF QKNRSYLKER VSETLGLLYA DHFPYRQIAT 420
  421 ARGVRRSPIH EQLKARGAVF GEVAGWERAN WFARDGQERE YRYSWKRQNW FENQREEHLA 480
  481 VRSGVGLFDM TSFGKIRVEG RDAQAFLQRL CANEMNVDPG RVVYTQMLNA RGGIESDLTV 540
  541 TRLSQTAFFL VVPGATLQRD LAWLRKHVRD EFVVITDVTA AESVLCVMGP RARELMQKVS 600
  601 PNDFSNEAHP FATAREIEIG MGLARAHRVT YVGELGWELY VSTDQAAHVF ETLELAGADV 660
  661 GLKLCGLHTL DSCRIEKAFR HFGHDITDED HVLEAGLGFA VKPGKGEFIG REAVLAKRDN 720
  721 GLSRRLVQFR LSDPEPLLFH NEAIVRDGEI VGTITSGNYG HHLGGAIGLG YVACKGESDA 780
  781 DVLASAYEIE IAGTRVKAEA SLKPMYDPKA ERVRA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle