YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15074003
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKTEAKQS GLWENVKVII QALLLAVVIR TVFFQPFTIP SGSMMPTLLV GDYIFVNKFA  60
   61 YGYSKYSLPF SPDLFSGRIF ASEPDRGDIV VFRFPPNPDI DYIKRLVGLP GDRIQVRNSV 120
  121 LYVNDKPVER VPDGTFRADD QYDTGGDVPV YRETMDNGMT YDTLDQFPDS RGDNTREFIV 180
  181 PEGHYFMMGD NRDNSADSRF DVGFVPAENL VGRASLIFFS LGNDTSFRQI WKWPANLRYD 240
  241 RLFKVVH

Type	Start	End	Confidence
Cytoplasmic	1	15	0.73
Transmembrane Helix	16	34	0.76
Non-Cytoplasmic	35	247	0.82