YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15963892
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELEMINATI LVVFPFSLAL AALSDLLTMT IPNRVSLVLL VSFFFVAPLA GLDLAQLGLH  60
   61 TVAAGLIFAV SFALFAANVM GGGDAKLLTA SAAWFGFNES LVTFLVYVSF FGGFLTLIVL 120
  121 LLRSKENLIL AARIPVPRLL LTAKKIPYGI AIALGGFAAY PSSPLMQLAF AQLS

Type	Start	End	Confidence
Cytoplasmic	1	7	0.83
Transmembrane Helix	8	27	0.91
Non-Cytoplasmic	28	34	0.66
Transmembrane Helix	35	52	0.94
Cytoplasmic	53	61	0.59
Transmembrane Helix	62	81	0.91
Non-Cytoplasmic	82	100	0.88
Transmembrane Helix	101	122	0.93
Cytoplasmic	123	142	0.90
Transmembrane Helix	143	163	0.85
Non-Cytoplasmic	164	174	0.79