YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54312120, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYQILKMSS CLFILLFLTP GILCICPLQC ICTERHRHVD CSGRNLTTLP PGLQENIIHL  60
   61 NLSYNHFTDL HNQLTPYTNL RTLDISNNRL ESLPAQLPRS LWNMSAANNN IKLLDKSDTA 120
  121 YQWNLKYLDV SKNMLEKVVL IKNTLRSLEV LNLSSNKLWT VPTNMPSKLH IVDLSNNSLT 180
  181 QILPGTLINL TNLTHLYLHN NKFTFIPDQS FDQLLQLQEI TLHNNRWSCD HTQNITYLLK 240
  241 WMMETKAHVI GIPCSKQVSS LKEQSMYPTP PGFTSSLFTM SEMQTVDTIN SLSMVTQPKV 300
  301 TNIPKQYRGK DTTFGVTLSK DTTFSSTDRA LEPYPEDTPT EMTSSREAAA ATLTIHLQDG 360
  361 MSSNASLTSA AKSSPAPVTL SITSGMPNNF SEMPQQSTTI NLRREETTAN VKTQPPSSAS 420
  421 AWKVNASLLL MLNAVVMLAG

Type	Start	End	Confidence
Signal Peptide	1	24	0.94
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	440	0.98