YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15140867, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFSKIFLGA GTALILASSA AYAETELTVY TSIEAVDLDR YKETFEKAHP DIKINWVRDS  60
   61 TGVMTAKLLA EKDNPQADVV WGVAATSLLL LKSEGMLEPY SPKNVEALDP RFVDGDKPPS 120
  121 WVGMDAYVAA LCYNTVEAGK LGLTPPTSWK DLTKPEYKGH VVMPNPNSSG TGFLDVSAWL 180
  181 QTFGEEEAWS FMDALHENIA AYTHSGSKPC KMAASGETVI GVSFEFPGAK AKTSGAPIDI 240
  241 IFPSEGSGWE AEATAIIAGT ANLEAAKTLV DWSISKEANE MYNVGYAVVA YPGVAKPIEN 300
  301 LPDDVADKMI KNDFEWAANN RARILKEWQK RYDAKSEPKS

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	340	0.99