YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ALLC_RHIME
Protein type:	Globular with Signal Peptide
Type Confidence:	0.39
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRAGEVLPG FAGGTINLAS AGLGARALFA TDEFFGPLER MLKDEPAAFH PGLYDDHGKW  60
   61 MDGWETRRRR GAGHDYAVIA LAAKGRIAGF DVDTSHFTGN YPSACSIEAC HSAEDPDEAT 120
  121 EWVQLLPVTG LGPNAHHFFA AHSDAVYSHI RLRIHPDGGI ARLRVYGTPA LDLKAMANET 180
  181 IDLASCLLGG RIVAFSNGHY GHERLIAPGR GANMGDGWET RRRREPGYDW IIVKLAARGH 240
  241 VERILVDTAH FKGNYPDACS LQAADLGGMT AECDMLVASS AMFWNELLPH RKLSADSVHE 300
  301 YGSDMLRHAD PVTHVRLNIY PDGGVSRLRI YGRVADPRSR

Type	Start	End	Confidence
Signal Peptide	1	21	0.39
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	340	0.96