YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|31432894, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSALRRSL RRLLPSSPPP PSPASAAAAA TFRRSFLSGG GDGVGESVEE FEKRMLSGLD  60
   61 DGLENRRGGS DWGWRGGFRN RGNSSSILAE LCTGFDSLED GLDEKLDEAS RTFHVTEEYE 120
  121 DDDYDYRPDV TFRRGSTYNV KDLDLTRPAA AKNPPRPQFQ TTTEEVLKKA DFRNVRFLAN 180
  181 FLTEAGIIIK RSQTRISAKA QRKVAREIKT ARALGLLPFT TMGQRPFIYG RSVEVNLSEE 240
  241 EYGYDFVDRR AGEPDENADD AVPDEDVAPG VENA

Type	Start	End	Confidence
Signal Peptide	1	28	0.97
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	274	0.99